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yxjJ [2019-06-12 11:03:37]
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yxjJ [2019-06-12 11:03:37]

general stress protein, survival of ethanol, paraquat and salt stresses
locus
BSU38930
pI
8.44
mw
10.42 kDa
protein length
87 aa Sequence Blast
gene length
264 bp Sequence Blast
function
survival of stress conditions
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.8|Resistance against oxidative and electrophile stress]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,996,829 → 3,997,092

    The protein

    [SW|Localization]

  • membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|F4C0A4050414B2FC9D6E571419D9537707DA4C05|yxjJ]-[gene|660443DFA2D175758677E4F88A2CEEC3BB5A2399|yxjI]
    description
    [Pubmed|10746760]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

    • regulatory mechanism

  • [protein|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU]: repression, in [regulon|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU regulon]

    • regulation

  • induced by stress ([protein|search|SigB]) [Pubmed|15805528]
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    Biological materials

    Mutant

  • MGNA-B800 (yxjJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1799 NBRP B. subtilis, Japan]
  • BKE38930 (Δ[gene|F4C0A4050414B2FC9D6E571419D9537707DA4C05|yxjJ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE38930 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGAAACTGTCCCTCTAAA, downstream forward: _UP4_TAATTCTATATTTCAAACGA
  • BKK38930 (Δ[gene|F4C0A4050414B2FC9D6E571419D9537707DA4C05|yxjJ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK38930 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAGAAACTGTCCCTCTAAA, downstream forward: _UP4_TAATTCTATATTTCAAACGA

    • References

  • 16672620,20525796,15805528,22582280